Detailed information of GATA3

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Dataset summary

TF Name: GATA3 Species: Homo sapiens
Cell-type/Tissue: SHSY5Y Condition/Source:
JASPAR ID: MA0037.3 Collections: Permissive
References: GEO GSE65664

External links

Models for profile: MA0037.3

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 9160 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 9160 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 9160 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 9160 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0037.3 151 3375 99.7538 -9.8283691320425
PWM MACS MA0037.3 173 4420 90.8 -20.916441181134
DNAshaped MACS MA0037.3 173 4355 0.99975 -20.507424735069
DNAshaped MACS MA0037.3 173 4349 0.99974 -20.409486622319
DNAshaped MACS MA0037.3 135 3058 0.99481 -8.8219780590189
TFFM MACS MA0037.3 135 2963 0.71666 -7.2611515669281

26 datasets found for the same TF (GATA3) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
GATA3 T47D Permissive Homo sapiens ENCSR000BMX MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000BST MA0037.3
GATA3 SKNSH Permissive Homo sapiens ENCSR000BTH MA0037.3
GATA3 A549 Permissive Homo sapiens ENCSR000BTI MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000EWS MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000EWV MA0037.3
GATA3 SHSY5Y Permissive Homo sapiens ENCSR000EXZ MA0037.3
GATA3 MCF7 dmso Permissive Homo sapiens GSE29073 MA0037.3
GATA3 MCF7 e2 Permissive Homo sapiens GSE29073 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE29180 MA0037.3
GATA3 CCRFCEM Permissive Homo sapiens GSE33850 MA0037.3
GATA3 RPMI8402 Permissive Homo sapiens GSE39179 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE40129 MA0037.3
GATA3 MCF7 e2 Permissive Homo sapiens GSE40129 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE51274 MA0037.3
GATA3 T47D Permissive Homo sapiens GSE51274 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE60270 MA0037.3
GATA3 MCF7 e2 Permissive Homo sapiens GSE60270 MA0037.3
GATA3 BE2C Permissive Homo sapiens GSE65664 MA0037.3
GATA3 KELLY Permissive Homo sapiens GSE65664 MA0037.3
GATA3 NGP Permissive Homo sapiens GSE65664 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE68976 MA0037.3
GATA3 THYMOCYTE Permissive Homo sapiens GSE71751 MA0037.3
GATA3 CD4 th1 Permissive Homo sapiens GSE72266 MA0037.3
GATA3 CD4 th2 Permissive Homo sapiens GSE72266 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE76181 MA0037.3