Detailed information of GATA3

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Dataset summary

TF Name: GATA3 Species: Homo sapiens
Cell-type/Tissue: MCF7 Condition/Source: e2
JASPAR ID: MA0037.3 Collections: Permissive
References: GEO GSE60270

External links

Models for profile: MA0037.3

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 14140 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 14140 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 14140 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 14140 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0037.3 165 5767 99.4129 -12.222298597568
PWM MACS MA0037.3 199 7401 89.6 -21.556455525829
DNAshaped MACS MA0037.3 199 7310 0.99965 -21.641058349954
DNAshaped MACS MA0037.3 199 7303 0.99967 -21.555866239553
DNAshaped MACS MA0037.3 161 4790 0.99072 -5.5143713894566
TFFM MACS MA0037.3 161 4422 0.75637 -2.6287807142396

26 datasets found for the same TF (GATA3) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
GATA3 T47D Permissive Homo sapiens ENCSR000BMX MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000BST MA0037.3
GATA3 SKNSH Permissive Homo sapiens ENCSR000BTH MA0037.3
GATA3 A549 Permissive Homo sapiens ENCSR000BTI MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000EWS MA0037.3
GATA3 MCF7 Permissive Homo sapiens ENCSR000EWV MA0037.3
GATA3 SHSY5Y Permissive Homo sapiens ENCSR000EXZ MA0037.3
GATA3 MCF7 dmso Permissive Homo sapiens GSE29073 MA0037.3
GATA3 MCF7 e2 Permissive Homo sapiens GSE29073 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE29180 MA0037.3
GATA3 CCRFCEM Permissive Homo sapiens GSE33850 MA0037.3
GATA3 RPMI8402 Permissive Homo sapiens GSE39179 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE40129 MA0037.3
GATA3 MCF7 e2 Permissive Homo sapiens GSE40129 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE51274 MA0037.3
GATA3 T47D Permissive Homo sapiens GSE51274 MA0037.3
GATA3 MCF7 Permissive Homo sapiens GSE60270 MA0037.3
GATA3 BE2C Permissive Homo sapiens GSE65664 MA0037.3
GATA3 KELLY Permissive Homo sapiens GSE65664 MA0037.3
GATA3 NGP Permissive Homo sapiens GSE65664 MA0037.3
GATA3 SHSY5Y Permissive Homo sapiens GSE65664 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE68976 MA0037.3
GATA3 THYMOCYTE Permissive Homo sapiens GSE71751 MA0037.3
GATA3 CD4 th1 Permissive Homo sapiens GSE72266 MA0037.3
GATA3 CD4 th2 Permissive Homo sapiens GSE72266 MA0037.3
GATA3 JURKAT Permissive Homo sapiens GSE76181 MA0037.3