Detailed information of GATA2

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Dataset summary

TF Name: GATA2 Species: Homo sapiens
Cell-type/Tissue: CD34 Condition/Source: dmso
JASPAR ID: MA0036.3 Collections: Permissive
References: GEO GSE60792

External links

Models for profile: MA0036.3

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8126 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8126 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 8126 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8126 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0036.3 128 2388 99.9257 -5.0403888230397
PWM MACS MA0036.3 198 4308 90.7 -22.608662229996
DNAshaped MACS MA0036.3 198 4472 0.99908 -28.118547345785
DNAshaped MACS MA0036.3 178 3401 0.99521 -12.580029938393
TFFM MACS MA0036.3 178 3173 0.86482 -7.9911271867455

19 datasets found for the same TF (GATA2) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
GATA2 K562 Permissive Homo sapiens ENCSR000BKM MA0036.3
GATA2 K562 Permissive Homo sapiens ENCSR000DKA MA0036.3
GATA2 ENDOTHELIAL umbilical vein Permissive Homo sapiens ENCSR000EVW MA0036.3
GATA2 K562 Permissive Homo sapiens ENCSR000EWG MA0036.3
GATA2 SHSY5Y Permissive Homo sapiens ENCSR000EYB MA0036.3
GATA2 HL60 Permissive Homo sapiens ERP008568 MA0036.3
GATA2 CD34 prog bmp Permissive Homo sapiens GSE29194 MA0036.3
GATA2 LNCAP Permissive Homo sapiens GSE38391 MA0036.3
GATA2 ME1 Permissive Homo sapiens GSE46044 MA0036.3
GATA2 LNCAP Permissive Homo sapiens GSE52725 MA0036.3
GATA2 TSU1621MT Permissive Homo sapiens GSE60477 MA0036.3
GATA2 CD34 acy957 Permissive Homo sapiens GSE60792 MA0036.3
GATA2 LNCAP csfcs Permissive Homo sapiens GSE69043 MA0036.3
GATA2 LNCAP etoh Permissive Homo sapiens GSE69043 MA0036.3
GATA2 LNCAP fbs Permissive Homo sapiens GSE69043 MA0036.3
GATA2 LNCAP r1881 Permissive Homo sapiens GSE69043 MA0036.3
GATA2 LNCAP shgata2 etoh Permissive Homo sapiens GSE69043 MA0036.3
GATA2 LNCAP shgata2 r1881 Permissive Homo sapiens GSE69043 MA0036.3
GATA2 TF1 Permissive Homo sapiens GSE73207 MA0036.3