Dataset summary
| TF Name: | SRF | Species: | Homo sapiens |
| Cell-type/Tissue: | ISHIKAWA | Condition/Source: | |
| JASPAR ID: | MA0083.3 | Collections: | Permissive |
| References: | ENCODE ENCSR000BTD | ||
External links
Models for profile: MA0083.3
Statistical details
| Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
|---|---|---|---|---|---|---|
| BEM | MACS | MA0083.3 | 81 | 4815 | 99.9882 | -5.5193489640978 |
| PWM | MACS | MA0083.3 | 129 | 8291 | 75.8 | -17.136711953984 |
| DNAshaped | MACS | MA0083.3 | 129 | 7162 | 0.97466 | -10.925580875355 |
| DNAshaped | MACS | MA0083.3 | 129 | 6921 | 0.96232 | -9.7108580752812 |
| DNAshaped | MACS | MA0083.3 | 95 | 4461 | 0.90532 | -2.6640083038749 |
| TFFM | MACS | MA0083.3 | 95 | 5113 | 0.8188 | -4.5923759948591 |
7 datasets found for the same TF (SRF) in other cell-types/tissues
| TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
|---|---|---|---|---|---|---|
| SRF | GM12878 | Permissive | Homo sapiens | ENCSR000BGE | MA0083.3 | |
| SRF | ESC | h1 | Permissive | Homo sapiens | ENCSR000BIV | MA0083.3 |
| SRF | K562 | Permissive | Homo sapiens | ENCSR000BLK | MA0083.3 | |
| SRF | HEPG2 | Permissive | Homo sapiens | ENCSR000BLV | MA0083.3 | |
| SRF | GM12878 | Permissive | Homo sapiens | ENCSR000BMI | MA0083.3 | |
| SRF | HCT166 | Permissive | Homo sapiens | ENCSR000BSC | MA0083.3 | |
| SRF | MCF7 | Permissive | Homo sapiens | ENCSR000BVA | MA0083.3 |