Dataset summary
| TF Name: | SRF | Species: | Homo sapiens |
| Cell-type/Tissue: | GM12878 | Condition/Source: | |
| JASPAR ID: | MA0083.3 | Collections: | Permissive |
| References: | ENCODE ENCSR000BMI | ||
External links
Models for profile: MA0083.3
Statistical details
| Model | Peak caller | Model ID | Enrichment Zone | TFBSs | Score threshold | Centrality p-value (log10) |
|---|---|---|---|---|---|---|
| BEM | MACS | MA0083.3 | 105 | 3643 | 99.9907 | -2.4477750200911 |
| PWM | MACS | MA0083.3 | 119 | 5362 | 76.7 | -13.041014928481 |
| DNAshaped | MACS | MA0083.3 | 119 | 4388 | 0.97151 | -6.0002999134127 |
| DNAshaped | MACS | MA0083.3 | 119 | 4172 | 0.95804 | -4.6327578417234 |
| DNAshaped | MACS | MA0083.3 | 75 | 3082 | 0.64203 | -4.3395057543877 |
| TFFM | MACS | MA0083.3 | 75 | 2768 | 0.82857 | -1.3036256205722 |
7 datasets found for the same TF (SRF) in other cell-types/tissues
| TF Name | Cell-line | Condition/Source | Collections | Species | Identifiers | JASPAR ID |
|---|---|---|---|---|---|---|
| SRF | GM12878 | Permissive | Homo sapiens | ENCSR000BGE | MA0083.3 | |
| SRF | ESC | h1 | Permissive | Homo sapiens | ENCSR000BIV | MA0083.3 |
| SRF | K562 | Permissive | Homo sapiens | ENCSR000BLK | MA0083.3 | |
| SRF | HEPG2 | Permissive | Homo sapiens | ENCSR000BLV | MA0083.3 | |
| SRF | HCT166 | Permissive | Homo sapiens | ENCSR000BSC | MA0083.3 | |
| SRF | ISHIKAWA | Permissive | Homo sapiens | ENCSR000BTD | MA0083.3 | |
| SRF | MCF7 | Permissive | Homo sapiens | ENCSR000BVA | MA0083.3 |