Detailed information of CTCF

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Dataset summary

TF Name: CTCF Species: Homo sapiens
Cell-type/Tissue: K562 Condition/Source:
JASPAR ID: MA0139.1 Collections: Permissive
References: GEO GSE70764

External links

Models for profile: MA0139.1

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 67457 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 67457 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 67457 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 67457 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0139.1 154 39495 99.9885 -43.661448158107
PWM MACS MA0139.1 164 52330 76.9 -85.543162359491
DNAshaped MACS MA0139.1 164 49588 0.98111 -79.245486574254
DNAshaped MACS MA0139.1 164 48660 0.97831 -75.652171094334
DNAshaped MACS MA0139.1 164 39185 0.95598 -42.831146679973
TFFM MACS MA0139.1 164 36481 0.84755 -32.176268367666

203 datasets found for the same TF (CTCF) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
CTCF MCF7 Permissive Homo sapiens ENCSR000AHD MA0139.1
CTCF GM12878 Permissive Homo sapiens ENCSR000AKB MA0139.1
CTCF K562 Permissive Homo sapiens ENCSR000AKO MA0139.1
CTCF ENDOTHELIAL umbilical vein Permissive Homo sapiens ENCSR000ALA MA0139.1
CTCF KERATINOCYTE Permissive Homo sapiens ENCSR000ALJ MA0139.1
CTCF EPITHELIAL mammary Permissive Homo sapiens ENCSR000ALV MA0139.1
CTCF HEPG2 Permissive Homo sapiens ENCSR000AMA MA0139.1
CTCF ESC h1 Permissive Homo sapiens ENCSR000AMF MA0139.1
CTCF MYOBLAST skeletal muscle Permissive Homo sapiens ENCSR000ANE MA0139.1
CTCF FIBROBLAST lung Permissive Homo sapiens ENCSR000ANO MA0139.1
CTCF MYOTUBE Permissive Homo sapiens ENCSR000ANS MA0139.1
CTCF HELA s3 Permissive Homo sapiens ENCSR000AOA MA0139.1
CTCF ASTROCYTE Permissive Homo sapiens ENCSR000AOO MA0139.1
CTCF OSTEOBLAST Permissive Homo sapiens ENCSR000APF MA0139.1
CTCF FIBROBLAST dermal Permissive Homo sapiens ENCSR000APM MA0139.1
CTCF DND41 Permissive Homo sapiens ENCSR000AQU MA0139.1
CTCF CD14 Permissive Homo sapiens ENCSR000ATN MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000AUE MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000AUF MA0139.1
CTCF BCELL Permissive Homo sapiens ENCSR000AUV MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000BHV MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000BHW MA0139.1
CTCF HEPG2 Permissive Homo sapiens ENCSR000BIE MA0139.1
CTCF SKNSH Permissive Homo sapiens ENCSR000BLX MA0139.1
CTCF ESC h1 Permissive Homo sapiens ENCSR000BNH MA0139.1
CTCF T47D Permissive Homo sapiens ENCSR000BNO MA0139.1
CTCF K562 Permissive Homo sapiens ENCSR000BPJ MA0139.1
CTCF ISHIKAWA Permissive Homo sapiens ENCSR000BQE MA0139.1
CTCF HCT166 Permissive Homo sapiens ENCSR000BSE MA0139.1
CTCF H54 Permissive Homo sapiens ENCSR000DKN MA0139.1
CTCF GM10248 Permissive Homo sapiens ENCSR000DKP MA0139.1
CTCF GM10266 Permissive Homo sapiens ENCSR000DKR MA0139.1
CTCF GM12878 Permissive Homo sapiens ENCSR000DKV MA0139.1
CTCF GM12891 Permissive Homo sapiens ENCSR000DKX MA0139.1
CTCF GM12892 Permissive Homo sapiens ENCSR000DKY MA0139.1
CTCF GM13976 Permissive Homo sapiens ENCSR000DKZ MA0139.1
CTCF GM13977 Permissive Homo sapiens ENCSR000DLB MA0139.1
CTCF GM19238 Permissive Homo sapiens ENCSR000DLD MA0139.1
CTCF GM19239 Permissive Homo sapiens ENCSR000DLE MA0139.1
CTCF GM19240 Permissive Homo sapiens ENCSR000DLF MA0139.1
CTCF GM20000 Permissive Homo sapiens ENCSR000DLG MA0139.1
CTCF ESC h1 Permissive Homo sapiens ENCSR000DLK MA0139.1
CTCF HELA s3 Permissive Homo sapiens ENCSR000DLO MA0139.1
CTCF HEPG2 Permissive Homo sapiens ENCSR000DLS MA0139.1
CTCF ENDOTHELIAL umbilical vein Permissive Homo sapiens ENCSR000DLW MA0139.1
CTCF K562 Permissive Homo sapiens ENCSR000DMA MA0139.1
CTCF KIDNEY Permissive Homo sapiens ENCSR000DMC MA0139.1
CTCF LNCAP Permissive Homo sapiens ENCSR000DME MA0139.1
CTCF LNCAP Permissive Homo sapiens ENCSR000DMF MA0139.1
CTCF LUNG Permissive Homo sapiens ENCSR000DMH MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DML MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DMO MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DMR MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DMS MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DMV MA0139.1
CTCF MEDULLOBLASTOMA Permissive Homo sapiens ENCSR000DMY MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000DNA MA0139.1
CTCF KERATINOCYTE Permissive Homo sapiens ENCSR000DNC MA0139.1
CTCF PANCREAS Permissive Homo sapiens ENCSR000DND MA0139.1
CTCF SPLEEN Permissive Homo sapiens ENCSR000DNI MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000DPF MA0139.1
CTCF FIBROBLAST skin leg Permissive Homo sapiens ENCSR000DPG MA0139.1
CTCF FIBROBLAST lung Permissive Homo sapiens ENCSR000DPM MA0139.1
CTCF FIBROBLAST pedal digit skin Permissive Homo sapiens ENCSR000DPP MA0139.1
CTCF FIBROBLAST gingiva Permissive Homo sapiens ENCSR000DPS MA0139.1
CTCF FIBROBLAST skin abdomen Permissive Homo sapiens ENCSR000DPV MA0139.1
CTCF FIBROBLAST aortic adventitia Permissive Homo sapiens ENCSR000DPY MA0139.1
CTCF BE2C Permissive Homo sapiens ENCSR000DQD MA0139.1
CTCF BJ Permissive Homo sapiens ENCSR000DQI MA0139.1
CTCF CACO2 Permissive Homo sapiens ENCSR000DQN MA0139.1
CTCF GM06990 Permissive Homo sapiens ENCSR000DQW MA0139.1
CTCF GM12801 Permissive Homo sapiens ENCSR000DQY MA0139.1
CTCF GM12864 Permissive Homo sapiens ENCSR000DRB MA0139.1
CTCF GM12865 Permissive Homo sapiens ENCSR000DRE MA0139.1
CTCF GM12866 Permissive Homo sapiens ENCSR000DRF MA0139.1
CTCF GM12867 Permissive Homo sapiens ENCSR000DRH MA0139.1
CTCF GM12868 Permissive Homo sapiens ENCSR000DRI MA0139.1
CTCF GM12869 Permissive Homo sapiens ENCSR000DRJ MA0139.1
CTCF GM12870 Permissive Homo sapiens ENCSR000DRK MA0139.1
CTCF GM12872 Permissive Homo sapiens ENCSR000DRN MA0139.1
CTCF GM12873 Permissive Homo sapiens ENCSR000DRP MA0139.1
CTCF GM12874 Permissive Homo sapiens ENCSR000DRR MA0139.1
CTCF GM12875 Permissive Homo sapiens ENCSR000DRU MA0139.1
CTCF GM12878 Permissive Homo sapiens ENCSR000DRZ MA0139.1
CTCF ASTROCYTE spinal cord Permissive Homo sapiens ENCSR000DSU MA0139.1
CTCF ASTROCYTE cerebellum Permissive Homo sapiens ENCSR000DSZ MA0139.1
CTCF ENDOTHELIAL brain microvascular Permissive Homo sapiens ENCSR000DTA MA0139.1
CTCF FIBROBLAST cardiac Permissive Homo sapiens ENCSR000DTF MA0139.1
CTCF MUSCLE cardiac Permissive Homo sapiens ENCSR000DTI MA0139.1
CTCF EPITHELIAL choroid plexus Permissive Homo sapiens ENCSR000DTL MA0139.1
CTCF HCT166 Permissive Homo sapiens ENCSR000DTO MA0139.1
CTCF EPITHELIAL esophagus Permissive Homo sapiens ENCSR000DTR MA0139.1
CTCF HEK293 Permissive Homo sapiens ENCSR000DTW MA0139.1
CTCF HELA s3 Permissive Homo sapiens ENCSR000DUB MA0139.1
CTCF HEPG2 Permissive Homo sapiens ENCSR000DUG MA0139.1
CTCF FIBROBLAST foreskin Permissive Homo sapiens ENCSR000DUH MA0139.1
CTCF HFF Permissive Homo sapiens ENCSR000DUM MA0139.1
CTCF HL60 Permissive Homo sapiens ENCSR000DUP MA0139.1
CTCF EPITHELIAL mammary Permissive Homo sapiens ENCSR000DUS MA0139.1
CTCF FIBROBLAST mammary Permissive Homo sapiens ENCSR000DUU MA0139.1
CTCF FIBROBLAST pulmonary artery Permissive Homo sapiens ENCSR000DUX MA0139.1
CTCF FIBROBLAST lung Permissive Homo sapiens ENCSR000DVA MA0139.1
CTCF EPITHELIAL kidney Permissive Homo sapiens ENCSR000DVH MA0139.1
CTCF EPITHELIAL retinal pigment Permissive Homo sapiens ENCSR000DVI MA0139.1
CTCF ENDOTHELIAL umbilical vein Permissive Homo sapiens ENCSR000DVP MA0139.1
CTCF FIBROBLAST villous mesenchyme Permissive Homo sapiens ENCSR000DVQ MA0139.1
CTCF K562 Permissive Homo sapiens ENCSR000DWE MA0139.1
CTCF MCF7 Permissive Homo sapiens ENCSR000DWH MA0139.1
CTCF NB4 Permissive Homo sapiens ENCSR000DWN MA0139.1
CTCF FIBROBLAST foreskin Permissive Homo sapiens ENCSR000DWQ MA0139.1
CTCF KERATINOCYTE Permissive Homo sapiens ENCSR000DWX MA0139.1
CTCF FIBROBLAST lung Permissive Homo sapiens ENCSR000DWY MA0139.1
CTCF EPITHELIAL proximal tubule Permissive Homo sapiens ENCSR000DXD MA0139.1
CTCF EPITHELIAL bronchial Permissive Homo sapiens ENCSR000DXI MA0139.1
CTCF SKNSH Permissive Homo sapiens ENCSR000DXQ MA0139.1
CTCF WERIRB1 Permissive Homo sapiens ENCSR000DXW MA0139.1
CTCF WI38 Permissive Homo sapiens ENCSR000DYB MA0139.1
CTCF A549 Permissive Homo sapiens ENCSR000DYD MA0139.1
CTCF GM12878 Permissive Homo sapiens ENCSR000DZN MA0139.1
CTCF IMR90 Permissive Homo sapiens ENCSR000EFI MA0139.1
CTCF K562 Permissive Homo sapiens ENCSR000EGM MA0139.1
CTCF SKNSH Permissive Homo sapiens ENCSR000EIC MA0139.1
CTCF OCILY7 Permissive Homo sapiens ENCSR027HML MA0139.1
CTCF DOHH2 Permissive Homo sapiens ENCSR084RDK MA0139.1
CTCF KARPAS422 Permissive Homo sapiens ENCSR113REG MA0139.1
CTCF SUDHL6 Permissive Homo sapiens ENCSR125DKL MA0139.1
CTCF LOUCY Permissive Homo sapiens ENCSR464DKE MA0139.1
CTCF OCILY3 Permissive Homo sapiens ENCSR756ZKG MA0139.1
CTCF NEURAL Permissive Homo sapiens ENCSR822CEA MA0139.1
CTCF HEPG2 Permissive Homo sapiens ERP000209 MA0139.1
CTCF MCF7 e2 shctcf Permissive Homo sapiens ERP000209 MA0139.1
CTCF MCF7 e2 shctr Permissive Homo sapiens ERP000209 MA0139.1
CTCF MCF7 Permissive Homo sapiens ERP000380 MA0139.1
CTCF MCF7 e2 Permissive Homo sapiens ERP000380 MA0139.1
CTCF MCF7 tam Permissive Homo sapiens ERP000380 MA0139.1
CTCF HEPATOCYTE Permissive Homo sapiens ERP000395 MA0139.1
CTCF MCF10A Permissive Homo sapiens ERP000783 MA0139.1
CTCF MCF7 tam Permissive Homo sapiens ERP000783 MA0139.1
CTCF ZR751 Permissive Homo sapiens ERP000783 MA0139.1
CTCF 813 Permissive Homo sapiens ERP002246 MA0139.1
CTCF GM12878 Permissive Homo sapiens ERP002246 MA0139.1
CTCF ISLET Permissive Homo sapiens ERP004003 MA0139.1
CTCF CHRF28811 Permissive Homo sapiens ERP008568 MA0139.1
CTCF HL60 Permissive Homo sapiens ERP008568 MA0139.1
CTCF U937 Permissive Homo sapiens ERP008568 MA0139.1
CTCF ESC Permissive Homo sapiens GSE20650 MA0139.1
CTCF ASC Permissive Homo sapiens GSE21366 MA0139.1
CTCF ISLET Permissive Homo sapiens GSE23784 MA0139.1
CTCF BJAB Permissive Homo sapiens GSE31485 MA0139.1
CTCF BL41 Permissive Homo sapiens GSE31485 MA0139.1
CTCF BCBL1 Permissive Homo sapiens GSE38411 MA0139.1
CTCF WI38VA13 Permissive Homo sapiens GSE41048 MA0139.1
CTCF IMR90 Permissive Homo sapiens GSE43070 MA0139.1
CTCF MONOCYTE blood Permissive Homo sapiens GSE43098 MA0139.1
CTCF MONOCYTE macrophage Permissive Homo sapiens GSE43098
CTCF MM1S Permissive Homo sapiens GSE43743 MA0139.1
CTCF SUM159 Permissive Homo sapiens GSE46055 MA0139.1
CTCF LYMPHOCYTE blood Permissive Homo sapiens GSE46832 MA0139.1
CTCF GM10847 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM12878 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM12890 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM12891 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM12892 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM18486 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM18505 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM18526 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM18951 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM19099 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM19193 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM19238 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM19239 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM19240 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM2255 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM2588 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM2610 Permissive Homo sapiens GSE50893 MA0139.1
CTCF GM2630 Permissive Homo sapiens GSE50893 MA0139.1
CTCF SNYDER Permissive Homo sapiens GSE50893 MA0139.1
CTCF GP5D Permissive Homo sapiens GSE51234 MA0139.1
CTCF GP5D sirad21 Permissive Homo sapiens GSE51234 MA0139.1
CTCF ESC h1 emb Permissive Homo sapiens GSE52457 MA0139.1
CTCF ESC h1 mesen Permissive Homo sapiens GSE52457 MA0139.1
CTCF ESC h1 mesen stem Permissive Homo sapiens GSE52457 MA0139.1
CTCF ESC h1 neur Permissive Homo sapiens GSE52457 MA0139.1
CTCF ESC h1 trop Permissive Homo sapiens GSE52457 MA0139.1
CTCF ERYTHROID Permissive Homo sapiens GSE67783 MA0139.1
CTCF HSPC Permissive Homo sapiens GSE67783 MA0139.1
CTCF HEK293 Permissive Homo sapiens GSE68976 MA0139.1
CTCF JURKAT Permissive Homo sapiens GSE68976 MA0139.1
CTCF ESC naive Permissive Homo sapiens GSE69646 MA0139.1
CTCF ESC primed Permissive Homo sapiens GSE69646 MA0139.1
CTCF THP1 Permissive Homo sapiens GSE69962 MA0139.1
CTCF THP1 2d3 Permissive Homo sapiens GSE69962 MA0139.1
CTCF K562 Permissive Homo sapiens GSE70482 MA0139.1
CTCF DELTA47 Permissive Homo sapiens GSE70764 MA0139.1
CTCF MCF7 Permissive Homo sapiens GSE70764 MA0139.1
CTCF OVCAR8 Permissive Homo sapiens GSE70764 MA0139.1
CTCF TLYMPHOCYTE naive Permissive Homo sapiens GSE74850 MA0139.1
CTCF SKNSH Permissive Homo sapiens GSE76815 MA0139.1
CTCF 786O normoxia Permissive Homo sapiens GSE78113 MA0139.1
CTCF MCF7 hypoxia Permissive Homo sapiens GSE78113 MA0139.1
CTCF MCF7 normoxia Permissive Homo sapiens GSE78113 MA0139.1
CTCF VCAP etoh Permissive Homo sapiens GSE84432 MA0139.1
CTCF VCAP r1881 Permissive Homo sapiens GSE84432 MA0139.1