Detailed information of RUNX1

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Dataset summary

TF Name: RUNX1 Species: Homo sapiens
Cell-type/Tissue: CD34 Condition/Source: adult
JASPAR ID: MA0002.2 Collections: Permissive
References: GEO GSE70660

External links

Models for profile: MA0002.2

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 13554 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 13554 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 13554 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 13554 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0002.2 134 3652 99.8667 -1.9290250616687
PWM MACS MA0002.2 176 6338 86.1 -17.997281104691
DNAshaped MACS MA0002.2 176 6096 0.99642 -16.969836782495
DNAshaped MACS MA0002.2 176 5906 0.99623 -15.02796531464
DNAshaped MACS MA0002.2 126 3294 0.95769 -1.2354256804712
TFFM MACS MA0002.2 126 3909 0.6955 -4.7728948067135

24 datasets found for the same TF (RUNX1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
RUNX1 K562 Permissive Homo sapiens ENCSR414TYY MA0002.2
RUNX1 K562 Permissive Homo sapiens ENCSR588AKU MA0002.2
RUNX1 HL60 Permissive Homo sapiens ERP008568 MA0002.2
RUNX1 SKNO1 Permissive Homo sapiens GSE23730 MA0002.2
RUNX1 JURKAT Permissive Homo sapiens GSE29180 MA0002.2
RUNX1 CCRFCEM Permissive Homo sapiens GSE33850 MA0002.2
RUNX1 SEM Permissive Homo sapiens GSE42075 MA0002.2
RUNX1 JURKAT Permissive Homo sapiens GSE42575 MA0002.2
RUNX1 KASUMI1 Permissive Homo sapiens GSE45738 MA0002.2
RUNX1 ME1 Permissive Homo sapiens GSE46044 MA0002.2
RUNX1 VCAP dht24h Permissive Homo sapiens GSE58428 MA0002.2
RUNX1 AMLBLAST Permissive Homo sapiens GSE60130 MA0002.2
RUNX1 TSU1621MT Permissive Homo sapiens GSE60477 MA0002.2
RUNX1 KASUMI1 Permissive Homo sapiens GSE62847 MA0002.2
RUNX1 BONE marrow Permissive Homo sapiens GSE64862 MA0002.2
RUNX1 CD34 Permissive Homo sapiens GSE64862 MA0002.2
RUNX1 MCF7 Permissive Homo sapiens GSE65313 MA0002.2
RUNX1 KASUMI1 Permissive Homo sapiens GSE65427 MA0002.2
RUNX1 U937 Permissive Homo sapiens GSE65427 MA0002.2
RUNX1 JURKAT Permissive Homo sapiens GSE68976 MA0002.2
RUNX1 CD34 fetal Permissive Homo sapiens GSE70660 MA0002.2
RUNX1 TF1 Permissive Homo sapiens GSE73207 MA0002.2
RUNX1 MCF7 Permissive Homo sapiens GSE75070 MA0002.2
RUNX1 JURKAT Permissive Homo sapiens GSE76181 MA0002.2