Detailed information of GATA1

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Dataset summary

TF Name: GATA1 Species: Homo sapiens
Cell-type/Tissue: K562 Condition/Source:
JASPAR ID: MA0035.3 Collections: Permissive
References: GEO GSE70482

External links

Models for profile: MA0035.3

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 114917 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 114917 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 114917 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 114917 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0035.3 170 45072 99.9154 -9.4029259959318
PWM MACS MA0035.3 224 76479 88.4 -39.700827736418
DNAshaped MACS MA0035.3 224 78952 0.99857 -45.99478787106
DNAshaped MACS MA0035.3 224 78873 0.99856 -45.851346895256
DNAshaped MACS MA0035.3 196 60426 0.99247 -23.569915167078
TFFM MACS MA0035.3 196 54918 0.77115 -15.602103129761

9 datasets found for the same TF (GATA1) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
GATA1 K562 Permissive Homo sapiens ENCSR000EFT MA0035.3
GATA1 K562 Permissive Homo sapiens ENCSR000EWM MA0035.3
GATA1 ERYTHROBLAST Permissive Homo sapiens ENCSR000EXP MA0035.3
GATA1 ERYTHROBLAST Permissive Homo sapiens ENCSR000EXR MA0035.3
GATA1 CHRF28811 Permissive Homo sapiens ERP008568 MA0035.3
GATA1 CD34 eryth bio Permissive Homo sapiens GSE29194 MA0035.3
GATA1 CD34 eryth bmp Permissive Homo sapiens GSE29194 MA0035.3
GATA1 ERYTHROID r3r4 Permissive Homo sapiens GSE43625 MA0035.3
GATA1 CD34 Permissive Homo sapiens GSE52924 MA0035.3