Detailed information of HNF4A

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Dataset summary

TF Name: HNF4A Species: Homo sapiens
Cell-type/Tissue: HEPG2 Condition/Source:
JASPAR ID: MA0114.3 Collections: Permissive
References: AE ERP000209

External links

Models for profile: MA0114.3

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 39197 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 39197 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 39197 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 39197 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0114.3 119 15600 99.9951 -20.558657152824
PWM MACS MA0114.3 143 24747 79.4 -57.753737577485
DNAshaped MACS MA0114.3 143 23920 0.98459 -56.224944553222
DNAshaped MACS MA0114.3 143 23430 0.9818 -53.46267955577
DNAshaped MACS MA0114.3 135 13705 0.95896 -11.440216246408
TFFM MACS MA0114.3 135 12183 0.85083 -5.7130711343691

12 datasets found for the same TF (HNF4A) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
HNF4A HEPG2 Permissive Homo sapiens ENCSR000BLF MA0114.3
HNF4A HEPG2 Permissive Homo sapiens ENCSR000EEU MA0114.3
HNF4A LIVER Permissive Homo sapiens ERP002306 MA0114.3
HNF4A CACO2 diff Permissive Homo sapiens GSE23436 MA0114.3
HNF4A CACO2 prolif Permissive Homo sapiens GSE23436 MA0114.3
HNF4A GP5D Permissive Homo sapiens GSE51234 MA0114.3
HNF4A GP5D sirad21 Permissive Homo sapiens GSE51234 MA0114.3
HNF4A LOVO phaseM Permissive Homo sapiens GSE51290 MA0114.3
HNF4A LOVO phaseS Permissive Homo sapiens GSE51290 MA0114.3
HNF4A HCT166 Permissive Homo sapiens GSE62890 MA0114.3
HNF4A HCT166 tcf4 Permissive Homo sapiens GSE62890 MA0114.3
HNF4A HCT166 tcf4 dox Permissive Homo sapiens GSE62890 MA0114.3