Detailed information of REST

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Dataset summary

TF Name: REST Species: Homo sapiens
Cell-type/Tissue: GM12878 Condition/Source:
JASPAR ID: MA0138.2 Collections: Permissive
References: ENCODE ENCSR000BGF

External links

Models for profile: MA0138.2

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8694 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8694 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Download TFBSs (hg38)

Download TFBSs in BED and FASTA format





Download 8694 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser





Download TFBSs (hg38)

Download TFBSs in BED and FASTA format

Download 8694 peaks in BED format

Download trained model

Download trained prediction models

Visualize TFBSs in UCSC

Send TFBSs BED file to UCSC genome browser

Summary plots

Statistical details

Model Peak caller Model ID Enrichment Zone TFBSs Score threshold Centrality p-value (log10)
BEM MACS MA0138.2 124 4245 99.9998 -34.477052733941
PWM MACS MA0138.2 130 5486 72.9 -62.720507755332
DNAshaped MACS MA0138.2 130 5116 0.99381 -56.298750852869
DNAshaped MACS MA0138.2 130 5097 0.99234 -55.867200607966
DNAshaped MACS MA0138.2 118 4570 0.98258 -47.107424352575
TFFM MACS MA0138.2 130 4370 0.88126 -35.222091573335

28 datasets found for the same TF (REST) in other cell-types/tissues

TF Name Cell-line Condition/Source Collections Species Identifiers JASPAR ID
REST K562 Permissive Homo sapiens ENCSR000ATM MA0138.2
REST ESC h1 Permissive Homo sapiens ENCSR000BHM MA0138.2
REST SKNSH Permissive Homo sapiens ENCSR000BJJ MA0138.2
REST HEPG2 Permissive Homo sapiens ENCSR000BJL MA0138.2
REST PANC1 Permissive Homo sapiens ENCSR000BJO MA0138.2
REST PFSK1 Permissive Homo sapiens ENCSR000BJP MA0138.2
REST HELA s3 Permissive Homo sapiens ENCSR000BMN MA0138.2
REST K562 Permissive Homo sapiens ENCSR000BMW MA0138.2
REST HEPG2 Permissive Homo sapiens ENCSR000BOT MA0138.2
REST PFSK1 Permissive Homo sapiens ENCSR000BOX MA0138.2
REST SKNSH Permissive Homo sapiens ENCSR000BOZ MA0138.2
REST PANC1 Permissive Homo sapiens ENCSR000BPK MA0138.2
REST A549 Permissive Homo sapiens ENCSR000BQP MA0138.2
REST GM12878 Permissive Homo sapiens ENCSR000BQS MA0138.2
REST MCF7 Permissive Homo sapiens ENCSR000BSP MA0138.2
REST HL60 Permissive Homo sapiens ENCSR000BTF MA0138.2
REST NEURAL Permissive Homo sapiens ENCSR000BTV MA0138.2
REST PANC1 Permissive Homo sapiens ENCSR000BUP MA0138.2
REST ISHIKAWA Permissive Homo sapiens ENCSR000BUU MA0138.2
REST HCT166 Permissive Homo sapiens ENCSR000BVI MA0138.2
REST K562 Permissive Homo sapiens ENCSR137ZMQ MA0138.2
REST HEPATOCYTE Permissive Homo sapiens ERP000395 MA0138.2
REST NCIH295R Permissive Homo sapiens GSE49014 MA0138.2
REST NCIH295R sf1 Permissive Homo sapiens GSE49014 MA0138.2
REST CD4 Permissive Homo sapiens GSE49570 MA0138.2
REST GP5D Permissive Homo sapiens GSE51234 MA0138.2
REST GP5D sirad21 Permissive Homo sapiens GSE51234 MA0138.2
REST K562 Permissive Homo sapiens GSE70482 MA0138.2