UniBind - A map of direct TF-DNA interactions across species

Examples: SRF K562 ENCODE ENCSR000BLV MA0492.1 Advanced Options

Species:

TF name:

Data source:

Collection:

Has log(p-value) below defined centrality threshold

Select a species to show cell lines.

UniBind 2018

This site shows the data for UniBind 2018. The most recent version of UniBind showing the latest data can be found here.

Browse UniBind by species

Homo sapiens

1983

ChIP-seq datasets

1

Species

315

Cell lines & Tissues

231

Transcription Factors

A map of direct TF-DNA interactions across species

What is UniBind?

UniBind is a comprehensive map of direct interactions between transcription factor (TFs) and DNA. High confidence TF binding site predictions were obtained from uniform processing of thousands of ChIP-seq data sets using the ChIP-eat software.

Citing UniBind

PubMed | Journal | PDF

R. Riudavets Puig, P. Boddie, A. Khan, J.A. Castro Mondragon, A. Mathelier,
UniBind: maps of high-confidence direct TF-DNA interactions across nine species. BMC Genomics 22, 482 (2021). https://doi.org/10.1186/s12864-021-07760-6.

M. Gheorghe, G.K. Sandve, A. Khan, J. Cheneby, B. Ballester, and A. Mathelier,
A map of direct TF-DNA interactions in the human genome. Nucleic Acids Research (2019) gky1210 https://doi.org/10.1093/nar/gky1210.